Bacillus subtilis
Microbiome CRO Services

Creative Biolabs partners with microbiome and synthetic biology teams to design, engineer, scale, and validate Bacillus subtilis strains and formats. We deliver end-to-end research support—from design and fermentation to formulation, stability, MoA data packages, and safety profiling—so you reach decision-ready milestones faster.

Selected by Leading R&D Programs

Global innovators rely on Creative Biolabs for reproducible B. subtilis workflows, transparent data, and manufacturing-minded process development.

B. subtilis microbiome CRO services partner-1 (Creative Biolabs Authorized) B. subtilis microbiome CRO services partner-1 (Creative Biolabs Authorized) B. subtilis microbiome CRO services partner-2 (Creative Biolabs Authorized) B. subtilis microbiome CRO services partner-3 (Creative Biolabs Authorized) B. subtilis microbiome CRO services partner-4 (Creative Biolabs Authorized)

Why a Dedicated B. subtilis CRO Matters

B. subtilis is a spore-forming, secretion-competent chassis with a recognized safety track record and broad utility across foods, feed, and microbiome research. Its spores endure gastric acid and bile, while vegetative cells excel at secreting enzymes and peptides—making it a versatile host for mechanism studies and product prototyping.

Beyond robustness, B. subtilis offers mature tools for genome engineering, signal peptide optimization, and strain domestication, enabling efficient heterologous expression and stable phenotype maintenance. These attributes reduce downstream processing burdens and accelerate scale-up.

B. subtilis bacterial cells through microscope (Creative Biolabs Authorized)

End-to-End Services for B. subtilis

Engineered Bacillus subtilis Design

Creative Biolabs engineers B. subtilis for secretion and spore traits via genome editing, signal peptide screening, and pathway rewiring. We support plasmid and chromosomal integration, build strain libraries, and verify genetic stability under process-relevant stresses, delivering candidate strains tailored for functional research, chassis applications, or spore-based delivery concepts with traceable design records and release criteria.

Stress Response Profiling

We quantify how B. subtilis performs under heat, desiccation, shear, oxidative stress, gastric acid, and bile salts. Using spore fraction, CFU retention, and recovery kinetics, we define tolerance thresholds and critical process windows that guide fermentation, drying, and formulation decisions, enabling rational selection of protectants and process parameters for robust shelf and GI transit performance.

Microbial Fermentation Services

Our team develops aerobic or microaerobic B. subtilis fermentations across batch, fed-batch, and continuous modes from shake flask to pilot. We monitor spore ratio, secreted protein or metabolite titers, and run-to-run consistency. Process models and DoE shorten optimization cycles and de-risk transfer to larger bioreactors and continuous operations. Industrial-scale case studies inform scale-up targets.

Downstream Process Development

For B. subtilis spores and soluble products (e.g., enzymes, lantibiotics), Creative Biolabs designs end-to-end clarification, concentration, purification, drying, and sterilization trains. We lock key process parameters (KPPs), yield windows, impurity profiles, and particle attributes, providing scalable unit-operation recipes compatible with GMP-like environments and future validation paths. Bacteriocin handling options are available when applicable.

Microbial Formulation Service

We formulate B. subtilis as powders, granules, capsules, or liquids. Using carrier matrices and protectant systems, we improve shelf stability and GI passage performance. Formulations are stress-challenged (temperature, humidity, light, freeze-thaw) and modeled for expiry prediction. Output includes target CFU/spore recovery specifications and packaging recommendations aligned to your use scenario and logistics profile.

Antimicrobial Susceptibility Testing

Creative Biolabs conducts standardized antimicrobial susceptibility testing for B. subtilis, covering MIC/MBC determination, time-kill kinetics, and growth recovery under clinically relevant agents. Panels span antibiotics and bacteriocins; optional stress preconditioning reflects process realities. Outputs include susceptibility profiles, resistance trends, and method/SOP details to support risk assessment, strain selection, and comparative benchmarking in programs globally.

Functional and MoA Screening

We characterize B. subtilis enzyme portfolios, biosurfactants, and antimicrobial peptides (e.g., bacteriocins such as subtilin/subtilosin), along with quorum-sensing and biofilm behaviors. Assays translate into mechanism-aligned data stories for publications or partner diligence. Optional comparative testing against reference strains clarifies differentiation and informs selection funnels for your program.

Biological Safety Test Services

We perform B. subtilis safety-relevant screens: hemolysis, toxin/virulence gene checks, antibiotic susceptibility, and mobile element risk. We align with QPS-style thinking and document the absence of red-flag attributes to streamline stakeholder review and future regulatory dialogues outside this research service. Reports include methods, cutoffs, and interpretive notes.

How We Deliver: B. subtilis Workflow

1

Project Intake & Goal Definition

We align on hypotheses, target attributes (CFU/spore ratio, titer, purity), and decision gates; then finalize assays and timelines.

2

Design & Build

We construct B. subtilis strains (integration, promoters, signal peptides) and establish traceable build records with QC checkpoints

3

Screen & Down-select

High-throughput physiology and function tests rank candidates by stability, productivity, and MoA-relevant readouts.

4

Process Development

DoE-driven fermentation and downstream parameters are optimized to reproducible yields and quality attributes; scale-up strategy is drafted.

5

Formulation & Stability

Prototype dosage forms are stress-challenged; shelf-life models and packaging guidance are issued.

6

Tech Transfer Package

We deliver SOPs, batch records, and analytics to enable internal replication or third-party scale-up.

Advantages of B. subtilis CRO Services

Integrated Biology-to-Process

Coordinated strain, fermentation, downstream, and formulation under one roof reduces iteration cycles.

Data You Can Defend

Transparent methods, reference controls, and statistical treatment enable confident internal reviews and partner diligence.

Secretion & Spore Expertise

Deep experience with B. subtilis secretion engineering and spore physiology informs practical decisions.

Scalability in Mind

Design choices anticipate oxygen transfer, shear, and mixing limits across vessels, easing technology transfer.

Mechanism-Aligned Assays

MoA screening ties phenotypes to pathways (e.g., bacteriocins, quorum signaling, biofilm modulation).

Safety-Oriented Screening

Safety-relevant assays align with QPS concepts to de-risk future regulatory conversations.

Research Applications of B. subtilis

Probiotic Gut Health & GI Function

Spore-forming B. subtilis survives gastric acid and germinates in intestines. Research strains are investigated for rebalancing flora and supporting bowel function, including evidence across IBS, constipation, diarrhea, and bloating.

Immune Modulation & Mucosal Defense

Probiotic B. subtilis strains are studied for enhancing mucosal immunity, including increased IgA and regulated cytokine responses. Programs assess innate and adaptive markers related to respiratory infection incidence, nonclinical settings.

Engineered Production & Delivery of Compounds

B. subtilis is engineered as a chassis for production and delivery of compounds, including vaccine antigens and biologics. Projects explore spore display, secretion systems, and payload stabilization for mechanism studies.

Agricultural Biocontrol & PGPR

B. subtilis supports plant health as a biocontrol and PGPR organism, suppressing pathogens via lipopeptides, competition, and induced systemic resistance, while enhancing root growth, nutrient availability, nitrogen and phosphorus solubilization studies.

Industrial Biomanufacturing & Food Fermentation

B. subtilis is a secretion-competent factory for industrial enzymes—proteases, amylases, xylanases, lipases—and engineered synthesis of vitamins B2 and K2, hyaluronic acid, and N-acetylglucosamine; strains underpin fermented foods such as natto.

Environmental Bioremediation & Biosensing

Engineered B. subtilis enables pollutant degradation and waste management via surface-displayed enzymes and hydrolase secretion, accelerating composting. Spores serve as biosensors for detecting heavy metals or antibiotics in environmental monitoring.

Sample submission form (Creative Biolabs Original)

Launch your B. subtilis study today by sharing samples and project goals

Case Study: Determination of the MICs for B. subtilis

To establish a baseline antibiogram for B. subtilis, Creative Biolabs executed a broth microdilution MIC study aligned with CLSI principles, assessing 13 antibiotics. The strain exhibited marked resistance to five β-lactams—cefotaxime, ceftriaxone, cefaclor, penicillin, and amoxicillin—while showing variable sensitivity to the remaining agents. This standardized workflow underpins risk assessment, comparator selection, and panel design for subsequent studies.

Representative MICs included erythromycin 1 mg/L; vancomycin and clindamycin 4 mg/L; gentamicin and streptomycin 8 mg/L; chloramphenicol 8 mg/L; and tetracycline and kanamycin 16 mg/L. Full results are documented with growth/no-growth matrices, SOPs, and acceptance ranges to support internal governance and partner diligence.

MICs of 13 Antiobiotics for B. subtilis (Creative Biolabs Original)Fig.1 MICs (mg/L) of 13 Antiobiotics for Bacillus subtilis
Determination of the MICs for B. subtilis brochure (Creative Biolabs Original)

Download the brochure to access methods, SOP highlights, and complete MIC tables for B. subtilis susceptibility profiling.

Download

B. subtilis Related Products

To support research projects, Creative Biolabs provides a selection of B. subtilis products:

Product Name Catalog No. Target Product Overview Size Price
Bacillus subtilis Spore Suspension 6633, 10^6 LBGF-0926-GF21 Bacillus subtilis Calibrated bacterial spore suspension for direct inoculation or substrate selection to monitor sterilization processes.
Bacillus subtilis Spore Suspension 6633, 10^7 LBGF-0926-GF22 Bacillus subtilis Calibrated bacterial spore suspension for direct inoculation or substrate selection to monitor sterilization processes.
Bacillus subtilis Spore Suspension 6633, 10^8 LBGF-0926-GF23 Bacillus subtilis Calibrated bacterial spore suspension for direct inoculation or substrate selection to monitor sterilization processes.
Bacillus subtilis Spore Suspension 6633, 10^9 LBGF-0926-GF24 Bacillus subtilis Calibrated bacterial spore suspension for direct inoculation or substrate selection to monitor sterilization processes.
Bacillus subtilis subsp. spizizenii LBGF-0926-GF5 Bacillus A Gram-positive, catalase-positive bacterium found in soil and in the gastrointestinal tract of ruminants, humans, and marine sponges.
Bacillus subtilis subsp. subtilis LBGF-0926-GF13 Bacillus A Gram-positive, catalase-positive bacterium found in soil and in the gastrointestinal tract of ruminants, humans, and marine sponges.
Bacillus subtilis -10^3 LBGF-0926-GF45 Bacillus subtilis Each instant-dissolve Bacillus subtilis pellet is designed to deliver 10-100 CFU per 0.1 mL and provides 6 hours of stability after rehydration.
Bacillus subtilis -10^5 LBGF-0926-GF46 Bacillus subtilis Each instant-dissolve Bacillus subtilis pellet is designed to deliver 10^3-10^4 CFU per 0.1 mL and provides 6 hours of stability after rehydration.
Bacillus subtilis -10^8 LBGF-0926-GF47 Bacillus subtilis Each instant-dissolve Bacillus subtilis pellet is designed to deliver 10^6-10^7 CFU per 0.1 mL and provides 6 hours of stability after rehydration.
Bacillus subtilis subsp. spizizenii DNA Standard LBGF-0224-GF19 Bacillus DNA standard DNA standard for quantitative research, assay development, verification/validation, and laboratory quality control.
Heat inactivated Bacillus subtilis LBGF-0224-GF44 Inactivated Bacillus Inactivated by heating to 65 °C for 30 minutes.
Bacillus subtilis DNA Standard LBGF-0125-GF2 Bacillus DNA Standard Microbial DNA standard.
Inactivated Bacillus subtilis, 1 mL LBGF-0125-GF148 Inactivated Bacillus Inactivated; provided as lyophilized powder.
Bacillus subtilis Genomic DNA LBGF-0925-GF16 Bacillus DNA High-quality, intact genomic DNA; purified and ready-to-use for PCR, qPCR, and Next-Generation Sequencing. 1–2 µg $720.00
Bacillus subtilis subsp. subtilis Genomic DNA LBGF-0925-GF85 Bacillus DNA High-quality, intact genomic DNA from the specified subspecies; purified and ready-to-use for PCR, qPCR, and Next-Generation Sequencing. 5 µg $1,080.00
Bacillus subtilis subsp. subtilis Genomic DNA LBGF-0925-GF526 Bacillus DNA High-quality, intact genomic DNA from the specified subspecies; purified and ready-to-use for PCR, qPCR, and Next-Generation Sequencing. 5 µg $720.00
Bacillus subtilis subsp. Spizizenii Genomic DNA LBGF-0925-GF667 Bacillus DNA High-quality, intact genomic DNA from the specified subspecies; purified and ready-to-use for PCR, qPCR, and Next-Generation Sequencing. 5 µg $720.00
Bacillus subtilis Var.aterrimus Genomic DNA LBGF-0925-GF873 Bacillus DNA High-quality, intact genomic DNA from the specified variety; purified and ready-to-use for PCR, qPCR, and Next-Generation Sequencing. 5 µg $720.00

FAQs

We match target attributes—secretion, sporulation, safety markers—to well-characterized parental lines. Early screens profile stress tolerance, productivity, and baseline MoA signals, ensuring the starting genotype fits your specification and scale considerations.

We evaluate integration sites, copy number, and promoter strength under process stresses. Stability is tracked via phenotype retention, sequencing spot checks, and multi-passage performance in fermentation-like conditions with pre-agreed acceptance ranges.

Key CQAs include spore fraction, germination efficiency, CFU recovery after GI-mimicking challenges, particle size distribution, moisture, residuals, and microbial purity. We set statistically justified specs to support shelf-life modeling and downstream processing decisions.

We perform MIC/MBC determinations, time-kill kinetics, and growth recovery with clinically relevant antibiotics and selected bacteriocins. Optional stress preconditioning reflects process realities. Outputs include susceptibility profiles, resistance trend analysis, comparators, and SOPs enabling benchmarking, risk assessment, and strain selection.

References

  1. Williams, Natasha, and Tiffany L. Weir. "Spore-based probiotic Bacillus subtilis: Current applications in humans and future perspectives." Fermentation 10.2 (2024): 78. https://doi.org/10.3390/fermentation10020078
  2. Chen, Yanzhen, et al. "Bacillus subtilis: current and future modification strategies as a protein secreting factory." World Journal of Microbiology and Biotechnology 40.6 (2024): 195. https://doi.org/10.1007/s11274-024-03997-x
  3. Abuhena, Md, et al. "Optimization of industrial (3000 L) production of Bacillus subtilis CW-S and its novel application for minituber and industrial-grade potato cultivation." Scientific Reports 12.1 (2022): 11153. https://doi.org/10.1038/s41598-022-15366-5
  4. Caulier, Simon, et al. "Overview of the antimicrobial compounds produced by members of the Bacillus subtilis group." Frontiers in microbiology 10 (2019): 302. https://doi.org/10.3389/fmicb.2019.00302
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