Clostridium beijerinckii
Microbiome CRO Services

Creative Biolabs supports biotechnology, bioenergy, and microbiome R&D teams worldwide with end-to-end Clostridium beijerinckii microbiome CRO solutions—from strain sourcing and characterization to anaerobic fermentation, process development, and engineered next-generation probiotic chassis design, all under rigorously controlled, research-grade conditions designed for data-driven decision making.

A Trusted Partner for Microbiome Research

Global R&D teams rely on Creative Biolabs for reliable, standardized C. beijerinckii microbiome research support.

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Why Focused C. beijerinckii CRO Support Matters

C. beijerinckii is a flagship solventogenic Clostridium, widely used for acetone–butanol–ethanol (ABE) fermentation and increasingly explored in microbiome and postbiotic research. It combines robust solvent production, spore formation, and the ability to utilize mixed carbohydrate streams from complex biomass.

However, its strict anaerobic lifestyle, biphasic metabolism (acidogenesis/solventogenesis), and sensitivity to stressors and inhibitors make it challenging to handle without specialized infrastructure and experience. Creative Biolabs offers integrated microbiome CRO services dedicated to C. beijerinckii, bridging early discovery, process development, and engineered probiotic-style applications.

C. beijerinckii microbiome research(Creative Biolabs Original)

C. beijerinckii Service Portfolio

Microbial Isolation and Screening Services

Creative Biolabs isolates and enriches C. beijerinckii from soil, fecal, feed, and fermentation samples using selective anaerobic culturing and spore-based recovery strategies. Candidate C. beijerinckii strains are screened for solvent yields, sugar utilization patterns, growth kinetics, and tolerance to lignocellulosic hydrolysate inhibitors. This systematic isolation and screening pipeline builds robust C. beijerinckii strain collections aligned with your downstream bioprocess or microbiome objectives.

Microbial Identification Services

To avoid mis-assignment among closely related solventogenic clostridia, C. beijerinckii isolates are confirmed at Creative Biolabs by a combination of 16S rRNA sequencing, whole-genome or targeted gene panels, fatty acid profiles, and phenotypic tests. Our polyphasic identification workflow verifies that cultures are authentic C. beijerinckii, free from co-cultured Clostridium species or facultative anaerobes, and suitable for use as reference strains, production strains, or microbiome research tools.

Microbial Fermentation Services

Creative Biolabs performs strictly controlled anaerobic fermentations with C. beijerinckii to characterize and optimize ABE production. We design experiments around pH control, redox balance, and nutrient regimes to map acidogenic and solventogenic phases, quantify acetone, butanol, and ethanol ratios, and evaluate performance on pure sugars and lignocellulosic hydrolysates. Our bioreactor and serum-bottle platforms support rapid iteration of C. beijerinckii fermentation strategies.

Lab-scale Production Services

For teams needing consistent material, Creative Biolabs scales C. beijerinckii from bench cultures into lab-scale bioreactors to generate biomass, spores, culture supernatants, and solvent-rich broths. Process parameters are tuned so that the resulting batches recapitulate industrially relevant ABE titers, solvent ratios, and by-product profiles. This lab-scale production capability supplies material for formulation development, omics analyses, and microbiome or co-culture test systems.

Downstream Process Development

Beyond fermentation, Creative Biolabs designs downstream workflows tailored to C. beijerinckii–based processes. Our teams evaluate cell separation methods, solvent stripping or pervaporation options, in situ product recovery strategies, and fractionation of aqueous and organic phases. We generate process concepts that help customers move from laboratory C. beijerinckii runs to robust development-stage flowsheets, with data on yield, purity, and energy demand for each step.

Stress Response Profiling

Solvent toxicity, pH shifts, and lignocellulosic inhibitors can severely impact C. beijerinckii performance. Creative Biolabs characterizes stress responses by exposing C. beijerinckii to gradients of butanol, acids, phenolic compounds, oxygen traces, and osmotic pressure, then tracking growth, solvent production, and viability. We combine physiological data with transcriptomic or targeted gene expression analyses to reveal stress-response mechanisms and guide strain engineering or process control strategies.

Microbial Stabilization Services

To ensure that C. beijerinckii retains its solventogenic phenotype and viability during storage and shipment, Creative Biolabs develops stabilization strategies including cryopreservation, lyophilization, and spore-based formats. We assess recovery, growth kinetics, solvent profiles, and sporulation behavior after storage under different conditions. These stabilization protocols support use of C. beijerinckii as a reference strain, production starter, or component of microbiome-related research products.

Probiotics Engineering and Optimization Services

Building on our live biotherapeutic platform, Creative Biolabs engineers C. beijerinckii as a research chassis for microbiome-focused applications. We design metabolic rewiring for targeted solvent or short-chain fatty acid production, introduce genetic circuits for enhanced stress tolerance, and evaluate compatibility with encapsulation or co-formulation systems. These engineered C. beijerinckii strains support gut model studies and postbiotic development without positioning them as finished consumer probiotics.

C. beijerinckii Project Workflow at Creative Biolabs

1

Project Scoping & Design

Define strain goals, application area, preferred substrates, and analytical endpoints for C. beijerinckii–centered studies.

2

Strain Acquisition & Characterization

Source or receive C. beijerinckii strains, confirm identity and purity, and perform baseline growth and metabolite profiling.

3

Anaerobic Fermentation & Optimization

Conduct systematic ABE or target metabolite fermentations, optimizing media, pH, feeding strategies, and process conditions.

4

Stress, Stability & Engineering Studies

Evaluate stress responses, develop stabilization protocols, and implement rational or combinatorial engineering where required.

5

Downstream & Formulation Concepts

Design downstream recovery and, when relevant, prototype microbiome-compatible or postbiotic-style delivery formats.

6

Data Delivery & Next-Step Planning

Provide structured datasets, reports, and recommendations, enabling teams to prioritize strains, process conditions, or follow-up studies.

Key Advantages of Our C. beijerinckii Microbiome Services

Deep Solventogenic Clostridia Expertise

Creative Biolabs combines experience across multiple solventogenic species, allowing direct benchmarking of C. beijerinckii against other industrial clostridia for ABE production and microbiome-relevant functions.

Strict Anaerobic Infrastructure

Dedicated anaerobic workstations, sealed bioreactors, and controlled gas handling systems ensure that C. beijerinckii cultures experience consistent low-oxygen conditions throughout isolation, screening, and fermentation.

Integration of Omics and Process Data

Our teams link fermentation outputs with genomic, transcriptomic, and metabolomic readouts to reveal how C. beijerinckii responds to stress, substrates, and engineering interventions at a systems level.

Flexible Substrate and Feedstock Support

We routinely work with glucose, mixed sugars, agricultural residues, and lignocellulosic hydrolysates, enabling realistic assessment of C. beijerinckii performance on cost-efficient feedstocks.

Postbiotic Development Experience

Creative Biolabs has an established live biotherapeutic and microbiome platform, supporting C. beijerinckii projects that intersect with gut models, postbiotic candidates, or host-microbe interaction studies under research-only frameworks.

End-to-End, Yet Modular, Engagement

From single-module stress profiling to fully integrated strain-to-process programs, C. beijerinckii projects can be scoped to fit your internal capabilities, timelines, and risk profile.

Research Applications of C. beijerinckii

Biobutanol Production and Green Solvent Research

C. beijerinckii is central to biobutanol research as it naturally reaches high butanol concentrations during ABE fermentation, enabling studies on renewable solvent production, process intensification, and integration into sustainable chemical supply chains.

Classical ABE Fermentation and Co-product Profiling

The organism degrades sugars and starches from substrates such as corn residues, molasses, switchgrass, and sweet potato into acetone, butanol, and ethanol, supporting work on product ratios, co-product utilization, and circular biorefinery concepts.

Strain Engineering for Enhanced Solvent Tolerance

Metabolic and genetic engineering strategies with C. beijerinckii allow researchers to enhance solvent tolerance, redirect flux toward butanol, and improve robustness against inhibitors, forming a basis for advanced strain libraries and chassis development.

Lignocellulosic Substrate Versatility

C. beijerinckii can co-ferment pentose and hexose sugars from lignocellulosic hydrolysates, making it a workhorse for evaluating pretreatment methods, detoxification strategies, and feedstock blends in lignocellulosic biobutanol workflows.

Gut Fermentation and Nutrient Conversion Studies

In gut-oriented models, C. beijerinckii contributes to fermentation of complex carbohydrates and may influence the pool of short-chain fatty acids, supporting mechanistic studies on nutrient digestion and microbiome functional capacity without direct human use.

Postbiotic and Microbial Metabolite Exploration

Because C. beijerinckii can generate solvent and acid metabolites with signaling or functional relevance, it is increasingly included in screens for postbiotic-style preparations and defined metabolite cocktails studied in vitro or in preclinical models.

Sample submission form (Creative Biolabs Original)

To begin your project, simply submit the sample form and our team will follow up with tailored guidance.

C. beijerinckii Related Products

The following C. beijerinckii products are available to support diverse microbiome and fermentation research needs.

Product Name Catalog No. Target Product Overview Size Price
Clostridium beijerinckii LBST-069FG Clostridium A Gram-positive, rod-shaped, motile bacterium. 200 µg $1,560.00
Clostridium beijerinckii; 8015 LBST-070FG Clostridium A Gram-positive, rod-shaped, motile bacterium. 200 µg $1,560.00
Clostridium beijerinckii; E604 LBST-071FG Clostridium A Gram-positive, rod-shaped, motile bacterium. Inquiry
Clostridium beijerinckii; 1.1921 LBST-072FG Clostridium A Gram-positive, rod-shaped, motile bacterium. Inquiry
Clostridium beijerinckii Genomic DNA LBGF-0925-GF968 Clostridium DNA High-quality, intact genomic DNA isolated from Clostridium beijerinckii; suitable for PCR, qPCR, and NGS. 5 µg $1,180.00

FAQs

We routinely support projects focused on ABE fermentation optimization, lignocellulosic feedstock evaluation, strain engineering and stress profiling, as well as microbiome-oriented studies using C. beijerinckii in in vitro gut models or co-culture systems.

Yes. We can onboard customer strains under strict biosafety and anaerobic handling procedures, confirm identity and purity, and then integrate them into customized isolation, fermentation, engineering, or stabilization workflows designed around your research questions.

Creative Biolabs supports targeted gene edits, pathway rewiring, and tolerance-enhancement strategies. Engineered strains are assessed through fermentation, stress-response assays, and stability studies to determine suitability for microbiome models or next-generation research formulations.

References

  1. Patakova, Petra, et al. "Acidogenesis, solventogenesis, metabolic stress response and life cycle changes in Clostridium beijerinckii NRRL B-598 at the transcriptomic level." Scientific reports 9.1 (2019): 1371. https://doi.org/10.1038/s41598-018-37679-0
  2. Li, Shubo, et al. "Pathway dissection, regulation, engineering and application: lessons learned from biobutanol production by solventogenic clostridia." Biotechnology for biofuels 13.1 (2020): 39. https://doi.org/10.1186/s13068-020-01674-3
  3. Guo, Pingting, et al. "Clostridium species as probiotics: potentials and challenges." Journal of animal science and biotechnology 11.1 (2020): 24. https://doi.org/10.1186/s40104-019-0402-1
  4. Olorunsogbon, Tinuola, et al. "Effects of Clostridium beijerinckii and medium modifications on acetone–butanol–ethanol production from switchgrass." Frontiers in Bioengineering and Biotechnology 10 (2022): 942701. https://doi.org/10.3389/fbioe.2022.942701
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